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Systematic Research in the Raphidophytes

The raphidophytes are a cosmopolitan group of microalgae in freshwater and marine habitats.  They are named for their peculiar extrusive organelles, or trichocysts, which under light microscopy, resemble the raphides (thin crystals of calcium oxalate) of plants.  Currently, there are seven genera belonging to the raphidophytes: Gonyostomum, Vacuolaria, and Merotricha (freshwater); Chattonella, Heterosigma, Fibrocapsa, and Haramonas (marine).

Most research and discussion of the raphidophytes is centered around their known harmful effects on fisheries.  Many marine raphidophytes have been implicated in large fish kills around the world, particularly in
Japan.  While the exact mechanism for causing fish mortality is currently under debate, some evidence supports production of a brevetoxin-like compound that interferes with the autonomic nervous system.  Most raphidophytes are not known to be toxic, and are relatively understudied. As a result of their potential economic importance, those few marine raphidophytes known to cause fish kills and harmful algal blooms have been studied most extensively.

Our current research into the systematics of the raphidophytes is aimed at answering 4 fundamental questions.


1. What is the phylogenetic relationship between raphidophytes, xanthophytes and phaeophytes (brown    
    algae)?

2. How diverse is the genus Chattonella structurally and molecularly?

3. What are the structural apomorphies that define raphidophyte genera?

4.  What are the phylogenetic relationships between freshwater and marine raphidophytes?


These questions are being answered using a two-fold approach of molecular phylogenetics and comparative ultrastructure.  Currently, efforts are underway to sequence the HSP-90 and actin genes from numerous raphidophytes, in order to create a well-supported phylogeny of the group.  This will be coupled to a large RAPD (randomly amplified polymorphic DNA) dataset to uncover infra-generic realtionships in Chattonella.  Finally the molecular data will be coupled with structural characters such as flagellar root systems, cortical cytoskeleton, flagellar transition region, pyrenoid morphology, mucocyst ultrastructure, plastid morphology, and swimming behavior.  The end result will be a well-supported phylogeny that will provide unique insights into pigment evolution, structural innovation, and the evolution of toxicity in the raphidophytes.

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