Genomics Program

Selected recent publications from the genetics/genomics/infectious disease laboratories, available on request.

Title Author
Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic information.
BMC Bioinformatics 5: 191.
YA Chen, DJ McKillen, S Wu, MJ Jenny, RW Chapman, PS Gross, GW Warr, JS Almeida - 2004
Molecular characterization and expression of vitellogenin receptor from white perch (Morone americana).
Biology of Reproduction: 70: 1720-1730.
doi: 10.1095/biolreprod.103.023655
N Hiramatsu, RW Chapman, JK Lindzey, MR Haynes, CV Sullivan - 2004
Diversity of metallothioneins in the American oyster, Crassostrea virginica, revealed by transcriptomic and proteomic approaches.
European Journal of Biochemistry 271: 1702-1712
MJ Jenny, AH Ringwood, K Schey, GW Warr, RW Chapman - 2004
In the line of fire: Justifying a genetic ethos in fisheries restoration and management.
Fifth William R. and Lenore Mote International Symposium: The Good, the Bad, and the Ugly: Integrating Marine and Human Ecology into Fisheries Management. Sarasota, FL (USA), 9-11 Nov 2004
J Travis, NK Jue, RW Chapman, DO Conover - 2004
Population genetic analysis of red grouper (Epinephelus
morio) and scamp (Mycteroperca phenax) from the southeastern U.S. Atlantic and Gulf of Mexico.
Marine Biology 144: 769-777.
MS Zatcoff, AO Ball, GR Sedberry - 2004
Population genetic analysis of white shrimp, Litopenaeus setiferus, using microsatellite genetic markers.
Molecular Ecology 12: 2319-2330.
AO Ball, RW Chapman - 2003
Large-scale genetic differentiation of Pagrus pagrus (L.) in the Atlantic.
Journal of Fish Biology 62: 1232-1237.
AO Ball, GR Sedberry, JH Wessel, III, RW Chapman - 2003
Genetic structure of camouflage grouper, Epinephelus polyphekadion (Pisces: Serranidae), in the western central Pacific.
Marine Biology 142: 771-776.
KL Rhodes, RI Lewis, RW Chapman, Y Sadovy - 2003
Crustins, homologues of an 11.5-kDa antibacterial peptide, from two species of penaeid shrimp, Litopenaeus vannamei and Litopenaeus setiferus.
Marine Biotechnology 4: 278-293.
TC Bartlett, BJ Cuthbertson, EF Separd, RW Chapman, PS Gross, GW Warr - 2002
Spatial homogeneity and temporal heterogeneity of red drum, Sciaenops ocellatus, microsatellites: effective population sizes and management implications.
Marine Biotechnology 4: 589-603.
RW Chapman, AO Ball, LR Mash - 2002
Diversity of the penaeidin antimicrobial peptides in two shrimp species.
Immunogenetics 54: 442-445.
BJ Cuthbertson, EF Shepard, RW Chapman, Gross PS - 2002
Potential indicators of stress response identified by expressed sequence tag analysis of hemocytes and embryos from the American oyster, Crassostrea virginica.
Marine Biotechnology 4: 81-93.
MJ Jenny, AH Ringwood, ER Lacy, AJ Lewitus, JW Kempton, PS Gross, GW Warr, RW Chapman - 2002
Population structure of spotted seatrout, Cynoscion nebulosus, along the Atlantic Coast of the United States.
In: The Biology of Sea Trout, S.A. Bortone ed. CRC Press, Boca Raton, FL
BA Wiley, RW Chapman - 2002
Characterization of polymorphic microsatellite loci from black grouper, Mycteroperca bonaci (Teleostei : Serranidae).
Molecular Ecology Notes. 2(3):217-219.
doi:10.1046/j>1471-8278 .2002.00194.x
MS Zatcoff, AO Ball, RW Chapman - 2002
EcoGenomics-a consilience for comparative immunology?
Developmental and Comparative Immunology 25: 549-551.
RW Chapman - 2001
Immune gene discovery by expressed sequence tag analysis of hemocytes and hepatopancreas in the Pacific White Shrimp, Litopenaeus vannamei, and the Atlantic White Shrimp, L. setiferus.
Developmental and Comparative Immunology 25: 565-577.
PS Gross, TC Bartlett, CL Browdy, RW Chapman, GW Warr - 2001
Population structure of the wreckfish Polyprion americanus determined with microsatellite genetic markers.
Marine Biology 137: 1077-1090.
AO Ball, GR Sedberry, MS Zatcoff, RW Chapman, Carlin JL - 2000
Stock identification of gag, Mycteroperca microlepis, along the southeast coast of the United States.
Marine Biotechnology 1: 137-146
RW Chapman, GR Sedberry, CC Koenig, BM Eleby - 1999
The genetic consequences of reproductive variance: studies of species with different longevities.
Life in the Slow Lane: Ecology and Conservation of Long-Lived Marine Animals. pp. 169-181. American Fisheries Society Symposium. Vol. 23
RW Chapman, GR Sedberry, JC McGovern, BA Wiley, JA Musick - 1999